PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028090747.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | YABBY | ||||||||
Protein Properties | Length: 168aa MW: 18633.2 Da PI: 8.2877 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 205.7 | 1.7e-63 | 2 | 156 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 +v+ +s++vCyv+CnfCntilavsvPst ++++vtvrCG C+ llsvn+ q ++ ++ l+++ + l+ +++ s+st + XP_028090747.1 2 SVDMASDRVCYVHCNFCNTILAVSVPSTNMLTIVTVRCGLCAYLLSVNMGALLQSVPLQD-LQKQQSSS-----------LEDASKESGSSSTCN 84 78899*********************************************9999999888.34333333...........333333333333333 PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + + e+ d+e p +pp i PPekrqrvPsaynrfikeeiqrik snPdishreafs+aaknWah+P+ihfgl XP_028090747.1 85 KFGS-FESADHEPPTMPP-ICPPEKRQRVPSAYNRFIKEEIQRIKVSNPDISHREAFSTAAKNWAHYPRIHFGL 156 3322.3566778888888.89***************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MSVDMASDRV CYVHCNFCNT ILAVSVPSTN MLTIVTVRCG LCAYLLSVNM GALLQSVPLQ 60 DLQKQQSSSL EDASKESGSS STCNKFGSFE SADHEPPTMP PICPPEKRQR VPSAYNRFIK 120 EEIQRIKVSN PDISHREAFS TAAKNWAHYP RIHFGLKLDG NKQAKLNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 7e-62 | YABBY family protein |