PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028090203.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 308aa    MW: 34082.3 Da    PI: 10.2719
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028090203.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA62.64.7e-20174207134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_028090203.1 174 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 207
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MTPTFPNSSS SPFPAALNQD QQLQLLYTAK PQLLYTAKPQ SSSSSSLSNH VFTYSIQDQS  60
TCHHREVQQL DYQQEANNFA SHGGSYDHSA LDVGGHENQS DHTGCSAKWM SSKMRLMRKM  120
MMNPDRMGTQ TPAYGHQMKF GDHQKKPSSP METDHSTTNT SSNNSNNINP IRVCSDCNTT  180
KTPLWRSGPR GPKSLCNACG IRQRKARRAM AAAAAATNGT ILASTTSTVI KTKAQHKDKK  240
SNNGHRAQFK KRSKLHTANP SHGRKKKLCF EDFLINLSKN LAFHQVFPQD EKEAAILLMA  300
ISCGFVHG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1250267KKRSKLHTANPSHGRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.19e-25GATA family protein