PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028089226.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 294aa MW: 33247.3 Da PI: 7.8529 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.6 | 1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l d+++ +G g W++ +++ g++R++k+c++rw++yl XP_028089226.1 14 RGAWTAMEDKILTDYIRVHGEGKWRSLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.6 | 1.9e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_028089226.1 67 RGNISRDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110 788999****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MGRRPCCAKE GLNRGAWTAM EDKILTDYIR VHGEGKWRSL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SRDEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NIGKKIQVLS 120 QPSATSTISN RYNSSNPQSK QNPSRTTDHS VAQPPLPNTE PSRLVRTKAS RCTKVFIRPD 180 HQNVTIHHNV GVGVAASDPG DDISPFISAK DDTSDFMMDF EMDENFLSDF LNTDFPPLYE 240 FHNDLKGDTT DTVTSSSSLD SNQNLLSSNE MLQSSDLQSL APLLDPCMDW LQDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 2e-62 | MYB family protein |