PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088914.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 521aa MW: 55340 Da PI: 7.3465

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.1	3.1e-38	134	262	3	105
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 + k++++++hTkv+gR+RR+R++a+caar+F+L++eLG ++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss+s+ s++ XP_028088914.1 134 PPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTKELGNKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGSTISAPpsksaphs 228 5699****************************************************************999877888888774333344455566 PP TCP 89 .................kaaksaakskksqksaa 105 + ++++++++q++++ XP_028088914.1 229 fhgalalahhhyeegfsHMLGFHHHQQQQQQQQQ 262 6666666666666666422222222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MELTDMQGNK HSTTTTPTTS QSHHHLHHHL HSGFDGRSHH QPPFIGSISI QAGLTSTAGG 60 GGGGSGSSSV SPSTSSTNTS TTSTTTTQLP PLQLVDASLA IATRSEGLAA VDPSKKANNQ 120 LQSPPQQLTI ATVPPKRSTK DRHTKVDGRG RRIRMPATCA ARVFQLTKEL GNKSDGETIE 180 WLLQQAEPAI IAATGTGTIP ANFSTLNVSL RSSGSTISAP PSKSAPHSFH GALALAHHHY 240 EEGFSHMLGF HHHQQQQQQQ QQPHLLTADQ IAEAMPGGGG DGSNSAENYL RKRYREDLFK 300 EESQQQPQGE VSESTSPSNK QFKGGNMQLP KQQQEAGPSS SMLRHTNMMP ATAMWAVAPA 360 PSSAAGSTFW MLPVTAGGAG GSAQSLAAAT GTSPSEPQMW PFATAPTTSG NTLQAPLHFM 420 PRFNIPGASL EFQGGRASPL QLGSMLMQQQ QPPPSQHLGL GMAETNLGML AALNAYSRGG 480 LNMNSEQNNP LEHHHHHQHQ HQQQHQSQAT DSGEDDPNSS H

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MELTDMQGNK HSTTTTPTTS QSHHHLHHHL HSGFDGRSHH QPPFIGSISI QAGLTSTAGG  60
GGGGSGSSSV SPSTSSTNTS TTSTTTTQLP PLQLVDASLA IATRSEGLAA VDPSKKANNQ  120
LQSPPQQLTI ATVPPKRSTK DRHTKVDGRG RRIRMPATCA ARVFQLTKEL GNKSDGETIE  180
WLLQQAEPAI IAATGTGTIP ANFSTLNVSL RSSGSTISAP PSKSAPHSFH GALALAHHHY  240
EEGFSHMLGF HHHQQQQQQQ QQPHLLTADQ IAEAMPGGGG DGSNSAENYL RKRYREDLFK  300
EESQQQPQGE VSESTSPSNK QFKGGNMQLP KQQQEAGPSS SMLRHTNMMP ATAMWAVAPA  360
PSSAAGSTFW MLPVTAGGAG GSAQSLAAAT GTSPSEPQMW PFATAPTTSG NTLQAPLHFM  420
PRFNIPGASL EFQGGRASPL QLGSMLMQQQ QPPPSQHLGL GMAETNLGML AALNAYSRGG  480
LNMNSEQNNP LEHHHHHQHQ HQQQHQSQAT DSGEDDPNSS H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	9e-70	TCP family protein