PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088032.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 577aa MW: 64293.7 Da PI: 8.6334

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	57.6	2.7e-18	173	225	1	54
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k+r+ Wt LH++Fv+av+qL G +kA+ k+il++m+ + ++ e v+ HL kY+ XP_028088032.1 173 KKRVSWTVVLHNKFVDAVRQL-GVDKAVAKEILQIMNEPMISQESVANHLRKYK 225 68*****************.*****************************7 PP
2	Myb_DNA-binding	24.4	6.7e-08	175	225	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r +WT ++ ++vdav+qlG + k I + m+ + +++ ++++ky+ XP_028088032.1 175 RVSWTVVLHNKFVDAVRQLGVDkaVAKEILQIMNePMISQESVANHLRKYK 225 679******************99999999999999999*********97 PP
3	Response_reg	78	3.3e-26	31	138	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++++ +l+k +y +v+++++++eal++l++++ +D++++D+ m +m+G+ell+ i e ++p+i+++a++++e +l+ ++ G XP_028088032.1 31 VLVVDDNVVCLKVVAALLNKCRY-KVTATTKATEALKMLRKNKesYDIVITDVIMLDMNGFELLEIIGLEM-DMPVIMMSANDDKESVLKGVRHG 123 89*******************.***********888889****************996644.8****************** PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a+d+l Kp +e+ XP_028088032.1 124 ARDYLIKPLRLAEVK 138 ******9998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MSKKEVVHVS LNRAAPTQSR VNANFPEGLS VLVVDDNVVC LKVVAALLNK CRYKVTATTK 60 ATEALKMLRK NKESYDIVIT DVIMLDMNGF ELLEIIGLEM DMPVIMMSAN DDKESVLKGV 120 RHGARDYLIK PLRLAEVKNI WQHVVRQNLF NTMKSGIVQA GTDQNPSAQK KKKKRVSWTV 180 VLHNKFVDAV RQLGVDKAVA KEILQIMNEP MISQESVANH LRKYKNALRK ENTKAKMSQE 240 RENNINSNRT NGLLSDTITT SCIDQCLNTI NHHNRFAEQD MSTGITSFGS RLQTFGASTS 300 NAKLLQQNQL PPKVVADQMR PTVFGTVPPS QFFAANPSPH HEFNRMRFHS VNSRTKMFDD 360 NVKMSSSYLP SFNTGQSGPS SMPVSFGPYS CPPAAFNLDD VPFQMLGDAS NQLNPVSQPD 420 SLAMLLPWQH EERNLANLKV KEEPINFPFD MQQITDDSIR KGQFVQHRYP FENNAEREIK 480 SHHNNSSSSS DDGLLSIIVK QTLMYILTEG DLSMAAAVMD SGVIGCFVSG SFAALLEVGS 540 WSEDVILSPI GRLAAVGRWS DLCRLMEYIV LAAKVLG

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MSKKEVVHVS LNRAAPTQSR VNANFPEGLS VLVVDDNVVC LKVVAALLNK CRYKVTATTK  60
ATEALKMLRK NKESYDIVIT DVIMLDMNGF ELLEIIGLEM DMPVIMMSAN DDKESVLKGV  120
RHGARDYLIK PLRLAEVKNI WQHVVRQNLF NTMKSGIVQA GTDQNPSAQK KKKKRVSWTV  180
VLHNKFVDAV RQLGVDKAVA KEILQIMNEP MISQESVANH LRKYKNALRK ENTKAKMSQE  240
RENNINSNRT NGLLSDTITT SCIDQCLNTI NHHNRFAEQD MSTGITSFGS RLQTFGASTS  300
NAKLLQQNQL PPKVVADQMR PTVFGTVPPS QFFAANPSPH HEFNRMRFHS VNSRTKMFDD  360
NVKMSSSYLP SFNTGQSGPS SMPVSFGPYS CPPAAFNLDD VPFQMLGDAS NQLNPVSQPD  420
SLAMLLPWQH EERNLANLKV KEEPINFPFD MQQITDDSIR KGQFVQHRYP FENNAEREIK  480
SHHNNSSSSS DDGLLSIIVK QTLMYILTEG DLSMAAAVMD SGVIGCFVSG SFAALLEVGS  540
WSEDVILSPI GRLAAVGRWS DLCRLMEYIV LAAKVLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31920.1	5e-56	ARR-B family protein