PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087111.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Dof
Protein Properties Length: 344aa    MW: 36541.8 Da    PI: 9.207
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof107.56.8e-3470129362
          zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     e+alkcprC+stntkfCy+nnysl+qPr+fCk+Crry t+GGalr v vG+g+r+nk+s+
  XP_028087111.1  70 EAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYRTRGGALRSVLVGSGCRRNKRSK 129
                     7789*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MVFSSIPAYL DLSNWQQQQN PQIGTGSGNG NPHLPPLPLP PPPHQGDGSG SVRPGSVAEW  60
ARMANIPMPE AALKCPRCES TNTKFCYFNN YSLTQPRHFC KTCRRYRTRG GALRSVLVGS  120
GCRRNKRSKG SNNSKSLVSG GSGDGQTSSG SRSAISSSTS VGTASLLGLT PQIPPLRFMA  180
VPLSQLTDHH HHHYGEIGLN YSGILAPLVV TSDMNMNFHL GSSSLGLGGG GGGGSGIEHW  240
RLLQPTQIST MAGLDFSGVL YPFQGGVEPS GYGGEGSQVQ PSPPGLGFTT HQLGLVKMED  300
NQVQELNLSR QFLGIPRNDQ YWSGSSSAWT DLSGFSSSST RNPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.11e-40Dof family protein