PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028086754.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRF

Protein Properties

Length: 349aa MW: 39319.4 Da PI: 8.2432

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028086754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.7	2.3e-24	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e XP_028086754.1 76 DPEPGRCRRTDGKKWRCSKEAHPDSKYCERHMHRGRHRSRKPVE 119 79***************************************987 PP
2	QLQ	59.3	1.1e-20	10	41	2	33
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlq 33 +FTa+Q+q+L++Q+l++Ky+++++P+Pp+L+ XP_028086754.1 10 PFTATQWQELEQQALIFKYMVSGVPIPPHLIS 41 9*****************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MMMSARTKCP FTATQWQELE QQALIFKYMV SGVPIPPHLI STVKTSMESS SVMSSRFYPH 60 QPRWGSFEMG YGRKVDPEPG RCRRTDGKKW RCSKEAHPDS KYCERHMHRG RHRSRKPVEV 120 ITTTTTNSSS MPPTTNPNSA GAAATTTSII SYSLSAESYP FLNPHSSSSS RPPGFFLSPQ 180 SNTTHHLFSD SGSYSQAHKD YSYVHGVRDE VDSRAPFPEA SGTPLTTSSS NTAYSQLDFH 240 SLTGSGKSRE QQQQQQQQQQ KQHCFVLGSD FRSGKPMEVE RGEEKQKPFH HFFGEWQPKS 300 REYTSWLDIE EEEENQSSHG SFSTTQLSIS MPPSTQELFG SKSTFPTDG

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MMMSARTKCP FTATQWQELE QQALIFKYMV SGVPIPPHLI STVKTSMESS SVMSSRFYPH  60
QPRWGSFEMG YGRKVDPEPG RCRRTDGKKW RCSKEAHPDS KYCERHMHRG RHRSRKPVEV  120
ITTTTTNSSS MPPTTNPNSA GAAATTTSII SYSLSAESYP FLNPHSSSSS RPPGFFLSPQ  180
SNTTHHLFSD SGSYSQAHKD YSYVHGVRDE VDSRAPFPEA SGTPLTTSSS NTAYSQLDFH  240
SLTGSGKSRE QQQQQQQQQQ KQHCFVLGSD FRSGKPMEVE RGEEKQKPFH HFFGEWQPKS  300
REYTSWLDIE EEEENQSSHG SFSTTQLSIS MPPSTQELFG SKSTFPTDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	5e-46	GRF family protein