PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028086327.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ARR-B | ||||||||
Protein Properties | Length: 703aa MW: 77289.3 Da PI: 6.7596 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.9 | 2.3e-28 | 206 | 259 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G+ekA+Pk+il+lm+v+g+t+e+v+SHLQkYRl XP_028086327.1 206 KPRVVWSIELHRKFVAAVNQL-GIEKAVPKRILDLMNVEGITRENVASHLQKYRL 259 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 34 | 6.7e-11 | 208 | 258 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ +g t++++ s++qky+ XP_028086327.1 208 RVVWSIELHRKFVAAVNQLGIEkaVPKRILDLMNvEGITRENVASHLQKYR 258 678***********************************************7 PP | |||||||
3 | Response_reg | 76.7 | 8.2e-26 | 23 | 131 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+ + ++ll +l+k +y +v+++ +++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+++++++ + + G XP_028086327.1 23 VLAVDDDLTCLRLLDGLLRKCQY-HVTTTNQAKMALKMLRENKnrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDPKLVMKGITHG 115 799********************.***************888888*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp+ +eel++ XP_028086327.1 116 ACDYLVKPVRIEELRN 131 **************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 703 aa Download sequence |
MTIEEIRGHL RDESDKFPVG MRVLAVDDDL TCLRLLDGLL RKCQYHVTTT NQAKMALKML 60 RENKNRFDLV ISDVHMPDMD GFKLLELVGL EMDLPVIMLS ANSDPKLVMK GITHGACDYL 120 VKPVRIEELR NIWQHVIRRK KFESKNQNKS STQDMAHQGN GEGGQGGPTT TGNSDQNGKL 180 NRKRKDEEEE GEENENDSDD PSSQKKPRVV WSIELHRKFV AAVNQLGIEK AVPKRILDLM 240 NVEGITRENV ASHLQKYRLY LKRISSVATQ QANIVAALGG KDSSYMRMSL LDGLGDYRTL 300 SGSGRLSNPA LSSYQTGGML GRLNSPSGMS LRSLSPSSLI QPSHTQNLGN SIAILGKLQP 360 VVSAANQNSS LFQGISTPLE LDQLQQSKCT SSHITEFNSG DDATFFTSAG TLSDNRVSVG 420 SSRNSLPGAS SNPLILHGNP QQTQGGGVFS NQSALKVNSL NSEPFDAGLS VSNFLDNGRR 480 NENWQSTIHL SKFSSNGLPL SEPFNHNQLP PNNMRNNNSS ITPCIQSDFS STNSISALVE 540 DSRGEIQCQQ AGLAGYVVQH RNQAIGQRWG EHKQDYTQNP NNVFSTWNSI IPANGVMGPL 600 SQSLDQNNGF CNRKIDASSV SQSNSRASTF PQFSEIEKSA MDTKMRSNED YILEQTKSHG 660 GFVHNGYDSL DDLMNAMIKR EQNGTGLMDG EFGFDAYSFG SCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-114 | ARR-B family protein |