PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028086304.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GATA | ||||||||
Protein Properties | Length: 159aa MW: 17241.9 Da PI: 10.7536 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 62.8 | 3.9e-20 | 21 | 55 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ C+ttkTplWR gp g+k+LCnaCG++yrkk++ XP_028086304.1 21 CADCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRS 55 ********************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MNLSQKESMS EEVNDEMKKC CADCKTTKTP LWRGGPAGPK SLCNACGIRY RKKRSAMGGL 60 NKAPEKRKER SSTSSAAATA AAATAAKNKT SSSSGDNGKG VNLSEDLRAR LMALGKEMVM 120 LQRQRSPMKK RQRISRKFGE EEKQAAFLLM ALSCGSVFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 2e-21 | GATA family protein |