PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028086252.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Nin-like | ||||||||
Protein Properties | Length: 213aa MW: 24862.5 Da PI: 7.8927 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 83.9 | 1.5e-26 | 103 | 152 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + ++l++++kyF+ pi++AAkeL+v+lTvLK++CR+++I+RWPhRkiksl XP_028086252.1 103 AALELDEIQKYFDVPITKAAKELKVGLTVLKKRCRELNIMRWPHRKIKSL 152 57999*******************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MNSFMEFDLC QTPYQNNQIT HFEFKDFQDF RGGDMGFWDF NIPSFFDDIV MDTKVEIMNS 60 SSDHHLESVG GSLASNNEVQ EFAAIEREEV KRQSCGNGKS KCAALELDEI QKYFDVPITK 120 AAKELKVGLT VLKKRCRELN IMRWPHRKIK SLKSLIDNVK ELGLTREIEM LEEHRRMVEK 180 LPELELTERT KKLRQACFKA NYKKRRSLAS LSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53040.1 | 2e-46 | Nin-like family protein |