PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028085469.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | YABBY | ||||||||
Protein Properties | Length: 219aa MW: 24765.1 Da PI: 6.9289 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 210.9 | 4.5e-65 | 7 | 172 | 2 | 169 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 ++f+ eq+CyvqC++C+til+vsvP +sl++vvtvrCGhCtsllsvn++kas + + + +e +ee +e +++ +v ++s+s + XP_028085469.1 7 HLFDLQEQICYVQCGYCTTILLVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVPLHLFANSLNQDNEPKEEIIPQEAETQ-KVLDKRSPSLVI 100 78999********************************************999854322222112222223333333333333.334444555555 PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 ss +e+e++ v + v++PPekrqr+Psayn fikeei+r+ka+ P+++h+eafsaaaknWahfP+i ++ XP_028085469.1 101 SSDD-DEEEEDAVLVNHVVNKPPEKRQRAPSAYNNFIKEEIRRLKAKYPNMTHKEAFSAAAKNWAHFPPIQYK 172 5544.44444455555669***************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MSTAVNHLFD LQEQICYVQC GYCTTILLVS VPCSSLSMVV TVRCGHCTSL LSVNMMKASF 60 VPLHLFANSL NQDNEPKEEI IPQEAETQKV LDKRSPSLVI SSDDDEEEED AVLVNHVVNK 120 PPEKRQRAPS AYNNFIKEEI RRLKAKYPNM THKEAFSAAA KNWAHFPPIQ YKRDGESCGQ 180 GAERKMPRTS DVGEVHVEGN GFRERKASRH SIWTKTPFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 3e-83 | YABBY family protein |