PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028084881.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 363aa    MW: 39466.4 Da    PI: 4.4826
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028084881.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.65.3e-16217253135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_028084881.1 217 CHHCGVSEnsTPAMRRGPAGPRTLCNACGLMWANKGT 253
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MEAANPQPLQ ARPYEEHAQV PAIQIEDDDD GEYEDGVDGG GDDAMDEAEE AHVTSVNASD  60
HHRHGGGDGG SGGVVVASRT SELTLAFEGE VYVFPAVTPE KVQAVLLLLG GREIPTGVPT  120
IDVPFDQNNK DLDDNPKRSN LSRRIASLVR FREKRKERCF DKKIRYNVRK EVAQRMHRKN  180
GQFASLKKSP GAACWDSPNS CPQEDSTPRP ETVVRRCHHC GVSENSTPAM RRGPAGPRTL  240
CNACGLMWAN KGTLRDLNKG GRNLSLDQIE PETPIDIKPS IMEGENFFGN QGDPGTPEDP  300
SRAVTGGTDN PSLNPDEEDT AEDHPNSSPM GIVNSSCNLD EQETLVELAS ASETEMEIPA  360
NFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-69GATA family protein