PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028084879.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GATA | ||||||||
Protein Properties | Length: 363aa MW: 39466.4 Da PI: 4.4826 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 49.6 | 5.3e-16 | 217 | 253 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ XP_028084879.1 217 CHHCGVSEnsTPAMRRGPAGPRTLCNACGLMWANKGT 253 **********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence |
MEAANPQPLQ ARPYEEHAQV PAIQIEDDDD GEYEDGVDGG GDDAMDEAEE AHVTSVNASD 60 HHRHGGGDGG SGGVVVASRT SELTLAFEGE VYVFPAVTPE KVQAVLLLLG GREIPTGVPT 120 IDVPFDQNNK DLDDNPKRSN LSRRIASLVR FREKRKERCF DKKIRYNVRK EVAQRMHRKN 180 GQFASLKKSP GAACWDSPNS CPQEDSTPRP ETVVRRCHHC GVSENSTPAM RRGPAGPRTL 240 CNACGLMWAN KGTLRDLNKG GRNLSLDQIE PETPIDIKPS IMEGENFFGN QGDPGTPEDP 300 SRAVTGGTDN PSLNPDEEDT AEDHPNSSPM GIVNSSCNLD EQETLVELAS ASETEMEIPA 360 NFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 1e-69 | GATA family protein |