PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084698.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Dof

Protein Properties

Length: 322aa MW: 35033 Da PI: 6.966

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084698.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	128.2	2.3e-40	51	111	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s XP_028084698.1 51 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS 111 7899******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MGFTSLQVCM DSSDWLQGTI HDDPGMDSSS PSGDMLTCSR PLMERRVRPQ HDQALKCPRC 60 DSTHTKFCYY NNYSLSQPRY FCKTCRRYWT KGGTLRNIPV GGGCRKNKKV SSKKSNDNNN 120 VSMSNPQNPG SSSRSPTDLQ LSFPEVQFSH LTNLIGSHGG IGSGNPSFLE SKYGAMLENP 180 RAIDFMEESS RSHDFMGSGE VGMMGGGLGG EMSHHHGLGG PNFHALCSSP FGMSLDGNSG 240 GGPGPFMDMS CQRLMLPYEV NHEDHHQNTM DVKPNTKLLS LDWQDQGCSD AGKDSFGYLN 300 GGLGSWTGLM NGYGPSTTNP LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	1e-59	Dof family protein