PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028084369.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 340aa MW: 38882.9 Da PI: 9.4814 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.4 | 3.3e-18 | 19 | 64 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G+ +W++Ia +++ gR++k+c++rw++ XP_028084369.1 19 RGHWRPAEDEKLRQLVEQYGPQNWNSIADKLQ-GRSGKSCRLRWFNQ 64 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 57.3 | 3.7e-18 | 71 | 114 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+++l+ a++ +G++ W++I+r ++ gRt++ +k++w+ XP_028084369.1 71 RRPFTEEEEDRLLAAHRIHGNK-WALISRLFP-GRTDNAVKNHWHV 114 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence |
MDESTGGGGS SDDARTCPRG HWRPAEDEKL RQLVEQYGPQ NWNSIADKLQ GRSGKSCRLR 60 WFNQLDPRIN RRPFTEEEED RLLAAHRIHG NKWALISRLF PGRTDNAVKN HWHVIMARKQ 120 REQSKLCGTK RSYQDAINGG DDSSNTLSYG FRRRNSKTQQ EDYSSKTRFE SCQFFEFQTP 180 NKERIFTVLP NLPPSSSSSP SWNFTRPTIS AANNSGDLFG REGRDFFNPS SNYCTTESSN 240 NTSEQALRRY YLNPSACRDF SPFGFPNYKR VVPSSFGYSK LGDGNGTHGM FKKELVRFGE 300 NSHPFEKKRE TIDEHENGDK NSIKQKDVPF IDFLGVGISS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 4e-67 | MYB family protein |