PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084126.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 810aa MW: 90263.5 Da PI: 5.5553

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	44.6	2.9e-14	182	229	4	51
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 +isle++ + ++++ dAA++Lg + ++LKr+CR+yGI+ W +R i++ XP_028084126.1 182 QISLEEILQTSKMKLGDAAQSLGASKSTLKRACREYGIEKWHRRFINK 229 89***************************************9998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 810 aa Download sequence
MGAQEKSPTA KHSMKRAEEL GLFVIDEEDN ETLLVHRISS DDIYRKQEDT IISWRDPELS 60 TELALSFQES TGCSYIWDHI CSVQRNMHFN TLNNETHHSV NSEVRELPAV ELSTLPIILK 120 EKDTVKVSKR KGNKSGGTVK VSTRKGDKSG GTGKASTRKG DKSGGTVKLS DREDNKTGVK 180 IQISLEEILQ TSKMKLGDAA QSLGASKSTL KRACREYGIE KWHRRFINKA VKKSAPPSMP 240 KLMRDSITDL QEQEQRKIKA TQTTSREVRS KKRQEPSTTS MLQEDFNPTF SEREIPLSQM 300 FGPTVHNSPD QTYQRKMRRD LISTDIEDEE SPNSTPKEAS QIPSNTRPHH PSKPSDPILN 360 QSTLNNSVDV TLEDPGTTEP FSINHRDAIL DAFPMEVLYP RTTEPINFPS VTSLDSSANG 420 NPTSIDEIPT RSHCDISSPR DQFNEPSQSK FQTNHGTETQ VEGTPTNCPE PTNENNTEVR 480 AEKMDNASSS DKQVGEHTPT PMDDSPHGIN QTTGVKNMEE NPSVNENIED INPYATSEPP 540 GISSSLQALE VPSTLISLET PHVSMEKTTI GETSTPITNP INPASTVVQA SSSSNTGSLS 600 IWEEIAAFQK SVEHISRLPK RLHHFKPEDQ QVISSFLNLI NTSFEEIISK QLMETLNCLT 660 AIQRLSPTPF SQNQLSHLAQ IISEWPVIVE TAQNCRNTIQ AKKDFLMAVQ TTSDSLTTTC 720 QASSNLSDQD RSLALEEARL EAELALVRQK RHELQQEMDI LGHEAKIILS KTENNLSSIQ 780 AAKEEFDQAQ ATFAATQSKW SIFAHIFRRD

Sequence ? help Back to Top

Protein Sequence Length: 810 aa Download sequence

MGAQEKSPTA KHSMKRAEEL GLFVIDEEDN ETLLVHRISS DDIYRKQEDT IISWRDPELS  60
TELALSFQES TGCSYIWDHI CSVQRNMHFN TLNNETHHSV NSEVRELPAV ELSTLPIILK  120
EKDTVKVSKR KGNKSGGTVK VSTRKGDKSG GTGKASTRKG DKSGGTVKLS DREDNKTGVK  180
IQISLEEILQ TSKMKLGDAA QSLGASKSTL KRACREYGIE KWHRRFINKA VKKSAPPSMP  240
KLMRDSITDL QEQEQRKIKA TQTTSREVRS KKRQEPSTTS MLQEDFNPTF SEREIPLSQM  300
FGPTVHNSPD QTYQRKMRRD LISTDIEDEE SPNSTPKEAS QIPSNTRPHH PSKPSDPILN  360
QSTLNNSVDV TLEDPGTTEP FSINHRDAIL DAFPMEVLYP RTTEPINFPS VTSLDSSANG  420
NPTSIDEIPT RSHCDISSPR DQFNEPSQSK FQTNHGTETQ VEGTPTNCPE PTNENNTEVR  480
AEKMDNASSS DKQVGEHTPT PMDDSPHGIN QTTGVKNMEE NPSVNENIED INPYATSEPP  540
GISSSLQALE VPSTLISLET PHVSMEKTTI GETSTPITNP INPASTVVQA SSSSNTGSLS  600
IWEEIAAFQK SVEHISRLPK RLHHFKPEDQ QVISSFLNLI NTSFEEIISK QLMETLNCLT  660
AIQRLSPTPF SQNQLSHLAQ IISEWPVIVE TAQNCRNTIQ AKKDFLMAVQ TTSDSLTTTC  720
QASSNLSDQD RSLALEEARL EAELALVRQK RHELQQEMDI LGHEAKIILS KTENNLSSIQ  780
AAKEEFDQAQ ATFAATQSKW SIFAHIFRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	8e-09	Nin-like family protein