PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082936.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 332aa MW: 37485.1 Da PI: 6.6603

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	3.9e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ ++ ++G+g +W + ++++g++R++k+c++rw++yl XP_028082936.1 14 KGPWSPEEDAKLKSYIDEHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.3	6.2e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ ++ G++ W+ Ia+ ++ gRt++++k++w++ XP_028082936.1 69 GGFSEEEDNIICSLFLSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKSYID EHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLFLSIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGK 120 QRKEQQARSS SLQQEMKREI SCSEAFMVSS EVINSVPYWP ELPVNMLAMN NPSSEDYFKD 180 QTSIRKLLVS IGGRFHDDDH HEPNNNSTNF QYPFDNSINT FASTASINSM NSSCSQQPNM 240 FEGFNNNYPI ELASNELVYN SPQQLDVLES FSGVDMVNGS GSGIISSAES TKWGEMISSL 300 VYPPMVASNY EAFQKRVIQD CSFQESRYFG LQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-83	MYB family protein