PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082685.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 522aa MW: 58174.7 Da PI: 5.2368

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	43.3	7.3e-14	441	488	4	51
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 eisle++ + +++++dAA++Lgv+ ++LK +CR+y I+ W R i++ XP_028082685.1 441 EISLEEILQTSKMKLEDAAQSLGVSKSTLKCACREYCIEKWHPRNINK 488 79***************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MICMDSKFDI DLDGGTSLPG RVFKHQFPES TSNLEFYSIT EYPQRDDAIR CGVRESFAFP 60 VFESSTQRCV GVIEVVAPPE EGVICNSYFR YRIYKDFEEF GLKCSVVFDH KDMELDEDEN 120 EAHTIALDEI KNVLKMVCDV HDLPLAHAWV PCEVGCPCRA LVDGGILHAS CYYKKDDYGE 180 DEDEDDYGED KNAFHHISSS FHLKNGVGVV GRALLSTNMV FCRDVAQLSL TEYPLAHYAR 240 KVGLSGCLAI CLESNCTGND VYVLEFFMPM SNNASENPHT SLRKILETMR KNFRCLRVAT 300 REELEEELHI EEISIQNGEK LDPVQIPQTT ISLPQLELSQ SEVEVMQVDS SDQQLVNAIN 360 TGSNVFGTEH NNIAITCTQE KDTVKASKRK GNKSGGTVKV STRKGDKSGG TGKASTRKGD 420 KSGGTVKASD REDNKTGVKI EISLEEILQT SKMKLEDAAQ SLGVSKSTLK CACREYCIEK 480 WHPRNINKNK NKGKAPMDPT VKKSAPPSMP KLMRDSITDL QE

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MICMDSKFDI DLDGGTSLPG RVFKHQFPES TSNLEFYSIT EYPQRDDAIR CGVRESFAFP  60
VFESSTQRCV GVIEVVAPPE EGVICNSYFR YRIYKDFEEF GLKCSVVFDH KDMELDEDEN  120
EAHTIALDEI KNVLKMVCDV HDLPLAHAWV PCEVGCPCRA LVDGGILHAS CYYKKDDYGE  180
DEDEDDYGED KNAFHHISSS FHLKNGVGVV GRALLSTNMV FCRDVAQLSL TEYPLAHYAR  240
KVGLSGCLAI CLESNCTGND VYVLEFFMPM SNNASENPHT SLRKILETMR KNFRCLRVAT  300
REELEEELHI EEISIQNGEK LDPVQIPQTT ISLPQLELSQ SEVEVMQVDS SDQQLVNAIN  360
TGSNVFGTEH NNIAITCTQE KDTVKASKRK GNKSGGTVKV STRKGDKSGG TGKASTRKGD  420
KSGGTVKASD REDNKTGVKI EISLEEILQT SKMKLEDAAQ SLGVSKSTLK CACREYCIEK  480
WHPRNINKNK NKGKAPMDPT VKKSAPPSMP KLMRDSITDL QE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	3e-61	Nin-like family protein