PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082681.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 765aa MW: 86322.1 Da PI: 4.7457

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	52.7	8.1e-17	578	626	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 isle++ + +++++dAA++Lgv+ ++LKr CR y IkRWP Rk +++ XP_028082681.1 578 GISLEEILQTSEMKLEDAAQSLGVSKSTLKRVCRGYRIKRWPPRKKNKV 626 599******************************************8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 765 aa Download sequence
MADEEEGFFS YFPDDFKEYM YKELNWLPKF YETFMAKYLN GVVFWSREDD EPERLSSTLP 60 DGDIFNLNKI IRDLLCTIIQ HWIGRPILVQ FWAPITTKEG RSFLTTRSQP FSLASLIYDG 120 HDILDIYGLC RYRMICMDSK FDIDLDGGNT CEQHLPARVF KHQFPESTPN VEFYSITEYP 180 QRDDALRCGL RESFAFPVFE SSTQRCVGVM EVVTLEEDLG FLICSSNFLI CSSYFRNDMY 240 IDFEEFGLKC SVVFDHEDME LDEDENEARI IALVEIENVL KMVCDVHDLP LAQAWVPCKV 300 GWPCRALVDG DILGVSCYYK KDDYGEDVDA FRRISSLFHL KNGVGVVGRA LLSTNMIFCR 360 DVTQFSLTEY PLAHYARKAA LSGCFAICLE SNYTGNDVYV LEFFMPMSNN ASEDPHTSLG 420 KILETMRKNF RCLRVASREE LGEELHIEDI TIQNGEKLDP VQIPQTTISL PLLELSQSEV 480 EVMQVDSSDQ QLENAINTGS NVFGTGHNSI AITCTQEKDT VKASKRKGNK SGGTVKASTR 540 KGNKSGGTVK ALTRKGDKSG GTVKSSDRED NKKGVKIGIS LEEILQTSEM KLEDAAQSLG 600 VSKSTLKRVC RGYRIKRWPP RKKNKVVCSQ LNESAPCVDL EQSSQLYLDD LPSAQPLATI 660 VHTEPHDTTM QDANVVTIKA KYAEGNAIKF RLSLSSRLIE LQQEVAQRLD LEAGTYCVKY 720 KDEDGDLILI ACDGDLQDYM SVSRSEGKTC IVVLLEPKVP IPDHL

Sequence ? help Back to Top

Protein Sequence Length: 765 aa Download sequence

MADEEEGFFS YFPDDFKEYM YKELNWLPKF YETFMAKYLN GVVFWSREDD EPERLSSTLP  60
DGDIFNLNKI IRDLLCTIIQ HWIGRPILVQ FWAPITTKEG RSFLTTRSQP FSLASLIYDG  120
HDILDIYGLC RYRMICMDSK FDIDLDGGNT CEQHLPARVF KHQFPESTPN VEFYSITEYP  180
QRDDALRCGL RESFAFPVFE SSTQRCVGVM EVVTLEEDLG FLICSSNFLI CSSYFRNDMY  240
IDFEEFGLKC SVVFDHEDME LDEDENEARI IALVEIENVL KMVCDVHDLP LAQAWVPCKV  300
GWPCRALVDG DILGVSCYYK KDDYGEDVDA FRRISSLFHL KNGVGVVGRA LLSTNMIFCR  360
DVTQFSLTEY PLAHYARKAA LSGCFAICLE SNYTGNDVYV LEFFMPMSNN ASEDPHTSLG  420
KILETMRKNF RCLRVASREE LGEELHIEDI TIQNGEKLDP VQIPQTTISL PLLELSQSEV  480
EVMQVDSSDQ QLENAINTGS NVFGTGHNSI AITCTQEKDT VKASKRKGNK SGGTVKASTR  540
KGNKSGGTVK ALTRKGDKSG GTVKSSDRED NKKGVKIGIS LEEILQTSEM KLEDAAQSLG  600
VSKSTLKRVC RGYRIKRWPP RKKNKVVCSQ LNESAPCVDL EQSSQLYLDD LPSAQPLATI  660
VHTEPHDTTM QDANVVTIKA KYAEGNAIKF RLSLSSRLIE LQQEVAQRLD LEAGTYCVKY  720
KDEDGDLILI ACDGDLQDYM SVSRSEGKTC IVVLLEPKVP IPDHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	3e-85	Nin-like family protein