PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028082680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Nin-like | ||||||||
Protein Properties | Length: 863aa MW: 97224.5 Da PI: 4.9519 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 50.9 | 3e-16 | 564 | 612 | 4 | 52 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 isle++ + +++++dAA++Lgv+ ++LKr CR y Ik WP+Rk +++ XP_028082680.1 564 GISLEEILQTSEMKLEDAAQSLGVSKSTLKRVCRGYRIKKWPSRKKNKV 612 599******************************************8775 PP | |||||||
2 | RWP-RK | 53.5 | 4.9e-17 | 676 | 724 | 4 | 52 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 eisle++ + +++++dAA++Lgv+ ++LKr CR y IkRWP Rk +++ XP_028082680.1 676 EISLEEILQTSEMKLEDAAQSLGVSKSTLKRVCRGYRIKRWPPRKKNKV 724 79*******************************************8775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 863 aa Download sequence |
MADEEEGFFS YFPDDFKEYM YKELNWLPKF YETFMAKYLN GVVFWSREDD EPERLSSTLP 60 DGDIFNLNKI IRDLLCTIIQ HWIGRPILVQ FWAPITTKEG RSFLTTRSQP FSLASLIYDG 120 HDILDIYGLC RYRMICMDSK FDIDLDGGNT CEQHLPARVF KHQFPESTPN VEFYSITEYP 180 QRDDALRCGL RESFAFPVFE SSTQRCVGVM EVVTLEEDLG FLICSSNFLI CSSYFRNDMY 240 IDFEEFGLKC SVVFDHEDME LDEDENEARI IALVEIENVL KMVCDVHDLP LAQAWVPCKV 300 GWPCRALVDG DILGVSCYYK KDDYGEDVDA FRRISSLFHL KNGVGVVGRA LLSTNMIFCR 360 DVTQFSLTEY PLAHYARKAA LSGCFAICLE SNYTGNDVYV LEFFMPMSNN ASEDPHTSLG 420 KILETMRKNF RCLRVASREE LGEELHIEDI TIQNGEKLDP VQIPQTTISL PLLELSQSEV 480 EVMQVDSSDQ QLENAINTGS NVFGTGHNSI AITCTQEKDT VKASKRKGNK SGGTVKASTR 540 KGDKSGGTVK SSDREDNKKG VKIGISLEEI LQTSEMKLED AAQSLGVSKS TLKRVCRGYR 600 IKKWPSRKKN KVVCSQLNES ALCVDLGQSS QLNLDDLPSA QLSATTGKTS TRKGDKSGYT 660 VKSSDRKDNK KGVKIEISLE EILQTSEMKL EDAAQSLGVS KSTLKRVCRG YRIKRWPPRK 720 KNKVVCSQLN ESAPCVDLEQ SSQLYLDDLP SAQPLATIVH TEPHDTTMQD ANVVTIKAKY 780 AEGNAIKFRL SLSSRLIELQ QEVAQRLDLE AGTYCVKYKD EDGDLILIAC DGDLQDYMSV 840 SRSEGKTCIV VLLEPKVPIP DHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 2e-98 | Nin-like family protein |