PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028082406.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 282aa    MW: 32198.6 Da    PI: 9.6903
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028082406.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.46.6e-082468345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      WT+eE +++ +a +++  +   +W ++ ++++ g++ +++  ++ 
   XP_028082406.1 24 EWTKEENKRFERALAMYDEKtpdRWLKVTAMIP-GKSVYDVMRWYK 68
                     7********************************.*******98886 PP
2Myb_DNA-binding45.81.4e-14124168347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ +++ + +++G+g+W+ I+r + k +t+ q+ s+ qky
   XP_028082406.1 124 PWTEDEHRRFLMGLQKHGKGDWRNISRNFVKSKTPTQVASHAQKY 168
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
METLCQSLYF SNLNMLMQES KSPEWTKEEN KRFERALAMY DEKTPDRWLK VTAMIPGKSV  60
YDVMRWYKEL EADVSNIEAG RVPFPGYVTS SVTMEMVDNH GFDGFRKRPL TGRSSDQQRK  120
KGVPWTEDEH RRFLMGLQKH GKGDWRNISR NFVKSKTPTQ VASHAQKYFI RQNSGAKDKR  180
RPSIHDITTL HLPNKNEPLP LPMLAAPHTT SKISLNCLDQ SNYEGDEAVM VLDSTHRNPF  240
LQYPYEIAAA AAAAAASQRG AHVGPLNSLF QMQSAMQYQV RG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05790.11e-84MYB family protein