PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028082069.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 581aa MW: 64224.6 Da PI: 8.1856 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.8 | 2.5e-18 | 58 | 101 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd ll ++v+++ g++Wk+Ia++++ gRt+ qc +rwqk+l XP_028082069.1 58 WTEEEDNLLSEVVRKFNGKNWKKIAECIP-GRTDVQCLHRWQKVL 101 *****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 107 | 153 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed+ ++ +v+++G + W++Ia+ ++ gR +kqc++rw+++l XP_028082069.1 107 KGPWTKAEDDCIIGLVEKYGCKKWSAIAKFLP-GRIGKQCRERWHNHL 153 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 45.3 | 2e-14 | 159 | 201 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE+ l+ +++ +G++ W+ ar ++ gRt++ +k++w+ XP_028082069.1 159 KEAWTKEEEVVLAYYHRIYGNK-WAELARFLP-GRTDNAIKNHWN 201 579*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 581 aa Download sequence |
MVEVKEEEEY IVGLTKEVQF ASCSPVSDSS CCDNLTPRSP SVQGMITCPM KRSSQAGWTE 60 EEDNLLSEVV RKFNGKNWKK IAECIPGRTD VQCLHRWQKV LNPELVKGPW TKAEDDCIIG 120 LVEKYGCKKW SAIAKFLPGR IGKQCRERWH NHLDPAIKKE AWTKEEEVVL AYYHRIYGNK 180 WAELARFLPG RTDNAIKNHW NCSVKKKLDL NLLPSSVQTA PPEFYSRGTK SVCTEVTVAT 240 HGVSETGSPD PRRGKKHVSE TCSTELVLGN ANVGDRCLEL NPSRIGTCRS SEAGVNKLLN 300 PLRRIQSNGT DAVASGLTSE PCHGNGYHDT HGPLKASSLD DFFLASGSTK SSFTPLNVVL 360 PVAPERMFES PKRHKGCGLG IMNSESGGLS SNSFLSLSTF GFREHKGEFG KKNIVHVTPH 420 PEDKYNGFLC NKPPHLKDSV IPKETGAGCA SVDPLDLALS ISVSGSSPES SLRKSVMSYK 480 NTPSIIRKQT SREADSRHSS DCNYTSAQNS CTHEGDFTNV KQGVHSLFHR SQTSVVDRSL 540 EKRLEYEFDK EWDSATVRCF TPVSATATSL LYFGANMMLT P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11510.2 | 5e-82 | MYB family protein |