PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028081439.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 407aa MW: 45938.2 Da PI: 8.7534

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028081439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	59.1	9.1e-19	144	196	1	54
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k+r+ Wt LH++Fv+av+ L G ekA+Pk+il++m+ + + ++ v+SHL + R XP_028081439.1 144 KKRVIWTAVLHNKFVNAVQLL-GVEKAVPKKILQIMNEPMIPRSSVASHLYRCR 196 68*****************.**************************7766 PP
2	Response_reg	45.4	4.3e-16	6	73	41	109
HHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 41 ekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 ++ +D++++D+ m +m+G+ell+ i e ++p+i+++a+ ++e++ + + Ga+d+l Kp+ ee+ + XP_028081439.1 6 KESYDIVITDVIMLDMNGFELLEIIGLEM-DMPVIMMSANYDQELVMKGVTHGARDYLIKPVRLEEVKN 73 456******************996644.8*****************************9999865 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MLRKNKESYD IVITDVIMLD MNGFELLEII GLEMDMPVIM MSANYDQELV MKGVTHGARD 60 YLIKPVRLEE VKNIWQHVVR KNLFNTMKFG TMQARANQNP PIPSSKRQRE KSNEEEEEEE 120 EQEQDDETNT HSNEESSAQK KKKKKRVIWT AVLHNKFVNA VQLLGVEKAV PKKILQIMNE 180 PMIPRSSVAS HLYRCRNALR KENTKAKMSQ ESKDNIDSNK TNGLLSDTIT TSCINQGLNT 240 INHHNRFAEQ YMSTGITSFG SRLQTFGAST SNATLLQQNQ LPPKVVADQM RPTVLGSVSP 300 SPFFELNGMR FHSINSGAKM FDDNVKMSSS QLPSFNTGQS GPSGMPVGFG PYSSFSNAWS 360 CFKSIESNFR PDSLAMLLPW QHEGRNLANL KVKEEPIDSI QKGQFPG

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MLRKNKESYD IVITDVIMLD MNGFELLEII GLEMDMPVIM MSANYDQELV MKGVTHGARD  60
YLIKPVRLEE VKNIWQHVVR KNLFNTMKFG TMQARANQNP PIPSSKRQRE KSNEEEEEEE  120
EQEQDDETNT HSNEESSAQK KKKKKRVIWT AVLHNKFVNA VQLLGVEKAV PKKILQIMNE  180
PMIPRSSVAS HLYRCRNALR KENTKAKMSQ ESKDNIDSNK TNGLLSDTIT TSCINQGLNT  240
INHHNRFAEQ YMSTGITSFG SRLQTFGAST SNATLLQQNQ LPPKVVADQM RPTVLGSVSP  300
SPFFELNGMR FHSINSGAKM FDDNVKMSSS QLPSFNTGQS GPSGMPVGFG PYSSFSNAWS  360
CFKSIESNFR PDSLAMLLPW QHEGRNLANL KVKEEPIDSI QKGQFPG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	146	KKKKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31920.1	9e-53	ARR-B family protein