PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028081437.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ARR-B | ||||||||
Protein Properties | Length: 472aa MW: 53026.6 Da PI: 9.2606 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 58.9 | 1.1e-18 | 209 | 261 | 1 | 54 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k+r+ Wt LH++Fv+av+ L G ekA+Pk+il++m+ + + ++ v+SHL + R XP_028081437.1 209 KKRVIWTAVLHNKFVNAVQLL-GVEKAVPKKILQIMNEPMIPRSSVASHLYRCR 261 68*******************.****************************7766 PP | |||||||
2 | Response_reg | 75.4 | 2.1e-25 | 30 | 138 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++++ +l+k +y +v+++++++eal++l++++ +D++++D+ m +m+G+ell+ i e ++p+i+++a+ ++e++ + + G XP_028081437.1 30 VLVVDDNVVCLKVVAALLNKCRY-KVTVTTKATEALKMLRKNKesYDIVITDVIMLDMNGFELLEIIGLEM-DMPVIMMSANYDQELVMKGVTHG 122 89*********************.***************888889********************996644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+d+l Kp+ ee+ + XP_028081437.1 123 ARDYLIKPVRLEEVKN 138 *********9999765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence |
MSKIDVHVSL NRAAPPQSRV DANFPEGLRV LVVDDNVVCL KVVAALLNKC RYKVTVTTKA 60 TEALKMLRKN KESYDIVITD VIMLDMNGFE LLEIIGLEMD MPVIMMSANY DQELVMKGVT 120 HGARDYLIKP VRLEEVKNIW QHVVRKNLFN TMKFGTMQAR ANQNPPIPSS KRQREKSNEE 180 EEEEEEQEQD DETNTHSNEE SSAQKKKKKK RVIWTAVLHN KFVNAVQLLG VEKAVPKKIL 240 QIMNEPMIPR SSVASHLYRC RNALRKENTK AKMSQESKDN IDSNKTNGLL SDTITTSCIN 300 QGLNTINHHN RFAEQYMSTG ITSFGSRLQT FGASTSNATL LQQNQLPPKV VADQMRPTVL 360 GSVSPSPFFE LNGMRFHSIN SGAKMFDDNV KMSSSQLPSF NTGQSGPSGM PVGFGPYSSF 420 SNAWSCFKSI ESNFRPDSLA MLLPWQHEGR NLANLKVKEE PIDSIQKGQF PG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 205 | 211 | KKKKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31920.1 | 1e-61 | ARR-B family protein |