PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028081368.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 486aa MW: 53307.1 Da PI: 6.1507

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028081368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.9	2.7e-30	229	288	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_028081368.1 229 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 288 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MDREENNEMD IDLSLKLDSK DESKEDEQVQ KDGLITAQDK KKAEVEEVDD EASVDMSLQD 60 NFKTEELSVL QMEMNRMKEE NKVLRKAVDQ TMKNYYNLQM KFAVIQQNNQ NKDPKIFLSL 120 NGNENAIQEM NRSPRALDIN TQTPESPSQE DDTRESHELG LSLRLQTYES QQEREEEKEK 180 NKQNQDLTRF APVQSNLPCG DLAGVTHVAS PPNRKARVSV RARCQTATMN DGCQWRKYGQ 240 KIAKGNPCPR AYYRCTVAPG CPVRKQVQRC LEDMSILITT YEGTHNHPLP VGATAMASTA 300 STAASFVLVD SSNPHSNGIT NFTQSPSFPY HSSHMLNSIS PYTPSIRNLN PNDPSKGIVL 360 DLTNNACDPQ HQQYPAAGPS SSAAQLGFPW MRSSLSNNHS GNAINANNLF SGTRGAEGNK 420 LLADNVTAIA SDPKFRVAVA AAISSLINKE NQKNHPMGNS LGPPKDGEGG GGGGGVGSSS 480 KQHLGS

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MDREENNEMD IDLSLKLDSK DESKEDEQVQ KDGLITAQDK KKAEVEEVDD EASVDMSLQD  60
NFKTEELSVL QMEMNRMKEE NKVLRKAVDQ TMKNYYNLQM KFAVIQQNNQ NKDPKIFLSL  120
NGNENAIQEM NRSPRALDIN TQTPESPSQE DDTRESHELG LSLRLQTYES QQEREEEKEK  180
NKQNQDLTRF APVQSNLPCG DLAGVTHVAS PPNRKARVSV RARCQTATMN DGCQWRKYGQ  240
KIAKGNPCPR AYYRCTVAPG CPVRKQVQRC LEDMSILITT YEGTHNHPLP VGATAMASTA  300
STAASFVLVD SSNPHSNGIT NFTQSPSFPY HSSHMLNSIS PYTPSIRNLN PNDPSKGIVL  360
DLTNNACDPQ HQQYPAAGPS SSAAQLGFPW MRSSLSNNHS GNAINANNLF SGTRGAEGNK  420
LLADNVTAIA SDPKFRVAVA AAISSLINKE NQKNHPMGNS LGPPKDGEGG GGGGGVGSSS  480
KQHLGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	3e-71	WRKY family protein