PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028081334.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Dof | ||||||||
Protein Properties | Length: 267aa MW: 28870.8 Da PI: 8.6842 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125.7 | 1.4e-39 | 36 | 95 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk s XP_028081334.1 36 EQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKGSA 95 6899****************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MDTAQWPQGI GVVNLKPMEG GSRPAITERR PRPHIEQALN CPRCNSTNTK FCYYNNYSLT 60 QPRYFCKTCR RYWTEGGSLR NVPVGGGSRK NKGSASSSPA SSKKIHDLTP PSFSQNPKIH 120 DGQDLNLAYP PTASDYNNSI NNPNATTANS SHVSAMELLK STGIASRGLS SFLPLSIADT 180 NNTIYPSGFP VQEFKPSLNF SLDGFENGYG SLQGVQETGS SARLFFPFED LKQTSNTAEF 240 EQNRGGQGGG GEGTSGYWTG MLGGGSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61850.1 | 2e-57 | Dof family protein |