PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028081067.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GATA | ||||||||
Protein Properties | Length: 325aa MW: 36398.2 Da PI: 6.3088 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 49.8 | 4.6e-16 | 225 | 258 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +C + kTp+WR gp g+ktLCnaCG++y + + XP_028081067.1 225 CLHCASEKTPQWRAGPMGPKTLCNACGVRYNSGR 258 99****************************9877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MEAPEIFFGG YFSAPGNKDF SLENCFSDHK PFGNNQFTID DLLDFSKDDQ VIMNDAFFDN 60 LPWNSADSST VMVVDGCNAS VSGNESQFSG NFVRRSFTDA QFSGELCVQY DDVAELEWLS 120 NFVDDSFSTD NLQNLQQISS TAKPPTDTSS SETPRDFRPK TSTNRHNPPI FTPDVSVPGK 180 PRSKRSRAAP CDWSSRLLTL SPTSEPNETT PSKKRYTAET LVRKCLHCAS EKTPQWRAGP 240 MGPKTLCNAC GVRYNSGRLV PEYRPAASPT FVSTKHSNSH RKVVELRRQK EQQLLSQSSG 300 FGVSNGQEYL IHHQSGLDYR HMLEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32890.1 | 3e-75 | GATA family protein |