PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028081049.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 266aa MW: 29913.4 Da PI: 8.3125

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028081049.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.2	1.5e-34	26	126	3	111
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaaks 97 g+kdrhsk++T++g++dRRvRlsa++a++f+d+qd+LG+ ++s++i+WL+++ak ai++l + + ++ + ++ +++ +++ + ++++ XP_028081049.1 26 GRKDRHSKVCTARGPKDRRVRLSAHTAIQFYDVQDRLGYGRPSEAIDWLMKEAKSAIDALDEKKPPTD--------QIQQPKQGLQEEHNRNQNQ 112 89*************************************************************33333........1222222222222222233 PP TCP 98 kksqksaasalnla 111 +++q+++ ++l+++ XP_028081049.1 113 NQNQRDPVNNLSFS 126 33333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MQESLKLKSS KRGKIIQGSR VLRSIGRKDR HSKVCTARGP KDRRVRLSAH TAIQFYDVQD 60 RLGYGRPSEA IDWLMKEAKS AIDALDEKKP PTDQIQQPKQ GLQEEHNRNQ NQNQNQRDPV 120 NNLSFSIPSS SSNEFESLNF LEARMGFENY ERKIAFSANS TIGGYVTDTM PQWNQKVVGE 180 QDPLLFSQGG TLQSSCFSSS SFLALMNPQI SGLNYDQMPE ITGNSFPGDG FSGFCVSPLV 240 RGEEDRHNPV PNKPFSASCL LHYYQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-35	TCP family protein