PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028081001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 273aa MW: 31831.2 Da PI: 5.5912 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.3 | 5.6e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l +++++G +W+ +++ g+ R++k+c++rw +yl XP_028081001.1 14 KGAWSPEEDNKLRAYIHRYGHWNWRELPKYAGLSRCGKSCRLRWMNYL 61 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 54.9 | 2.1e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+ Ed+l+ +++++lG++ W++Ia++++ gRt++++k++w+++l XP_028081001.1 67 RGKYTKAEDDLIMELHEKLGNK-WSAIAAKFP-GRTDNEIKNHWHTHL 112 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MVRTPSFDKN GTKKGAWSPE EDNKLRAYIH RYGHWNWREL PKYAGLSRCG KSCRLRWMNY 60 LRPNVKRGKY TKAEDDLIME LHEKLGNKWS AIAAKFPGRT DNEIKNHWHT HLKKRINENH 120 STFELKQKAI QISQSLANLE LQSHDSPRSE INHVTDELGS KDVTDEIYQQ ILESSPLSSQ 180 ELSSSDFSSS MTPDYALLSD KNWVGEDSMS SSESFEESVR NFWIELAFED FSYQQNEFSS 240 NLAEGESTFP CFLDHDDDSI EWFHQILKEL PEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 1e-57 | MYB family protein |