PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080418.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 231aa MW: 26334.7 Da PI: 9.6938

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080418.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.8	2.8e-21	90	149	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+ae++e+++++l +++ ++V++WFqN++a+e++ XP_028080418.1 90 TRWNPTTEQIGILEMLYRGgMRTPNAEQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 149 7***************99************************************97 PP
2	Wus_type_Homeobox	119.4	1.6e-38	90	151	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly+ G+rtPn+e+i++ita+L +yGkie+kNVfyWFQN+kaRerqkq XP_028080418.1 90 TRWNPTTEQIGILEMLYRGGMRTPNAEQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 151 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MESSMKVHQF ARGFWVHEPS SLTLGCKRLR PLVPKHSNNN NNSSSDSTIT AASFDLKSFI 60 RPQTVSPTKP LRRSEDMGET TQVETQPGGT RWNPTTEQIG ILEMLYRGGM RTPNAEQIEQ 120 ITAQLGKYGK IEGKNVFYWF QNHKARERQK QKRNSASLLG LGHCTRSIPA TTIATITLDT 180 STRGQVEREE ESPNKRKCRT WVLESLEEDK RYCKEEGDKT LELFPLHPEG R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	1e-69	WOX family protein