PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028080315.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 214aa MW: 24904.7 Da PI: 5.6842 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.9 | 1.3e-19 | 9 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++v ++G g+Wk I+++ g++R++k+c++rw++yl XP_028080315.1 9 KGSWTEEEDNLLRKYVDEYGQGNWKHIPSKSGLNRCRKSCRLRWLNYL 56 799*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.7 | 3.6e-15 | 62 | 107 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + +Ed+l++++++ lG++ W++Ia +++ gRt++++k++w++yl XP_028080315.1 62 RGHFAVDEDDLIIRLHRVLGNR-WSLIAGRIP-GRTANDIKNYWNSYL 107 5677789***************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MGSPHGLRKG SWTEEEDNLL RKYVDEYGQG NWKHIPSKSG LNRCRKSCRL RWLNYLRPNI 60 KRGHFAVDED DLIIRLHRVL GNRWSLIAGR IPGRTANDIK NYWNSYLSKK IPSESKNTIS 120 LKTHNNGTNS AKDLEPSQGD FQSSSDRKTE REWEDDEEEV DDTTSFWRSL LLEGEFLESN 180 QLRVENKEMV MFEHDDFFQG LGDLVEVMEI LGGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 1e-57 | MYB family protein |