PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080167.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 294aa MW: 31996.9 Da PI: 8.3474

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080167.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.9	1.3e-19	13	58	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEdell +v+++G+++W++I++ ++ gR++k+c++rw + XP_028080167.1 13 KGPWSPEEDELLQTLVQRHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 58 79****************************.*********985 PP
2	Myb_DNA-binding	54.8	2.2e-17	67	109	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde + +a++++G++ W+tIar + gRt++ +k++w++ XP_028080167.1 67 AFTAEEDETIMKAHAKFGNK-WATIARLLS-GRTDNAIKNHWNST 109 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MASLSRKDVD RIKGPWSPEE DELLQTLVQR HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS 60 PQVEHRAFTA EEDETIMKAH AKFGNKWATI ARLLSGRTDN AIKNHWNSTL KRKCSSMSDD 120 FNFPDGSHSH QPLKRSASVG PGTNVSGLYL NPSSPSGSDL SDSSFSGFPS AQVFRPVPLT 180 GGVPPPVHQI ETASTTVSDP PTSLTLSLPG SDSSDPSNQI ATPPAPPQGG QNVDFGAAIG 240 EKQFFSQEFL AVMQEMIKEE VRSYMSGIEQ NGRCLQAEAI RNAVVKRIGI SKIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	1e-77	MYB family protein