PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028079838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 168aa MW: 18825.1 Da PI: 9.5873 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.9 | 1.2e-20 | 17 | 70 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t+eqle Le+ F+++ +++ +++ +LAk+lgL+ rqV vWFqNrRa++k XP_028079838.1 17 KKKRLTSEQLESLESSFQEEIKLDPDRKMKLAKELGLQPRQVAVWFQNRRARWK 70 56779************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 122.3 | 2.4e-39 | 16 | 107 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl++eq+++LE+sF+ee kL+p+rK++la+eLglqprqvavWFqnrRAR+k+kqlE+ y++Lk ++d++++e+++L++ev++L++ +k XP_028079838.1 16 EKKKRLTSEQLESLESSFQEEIKLDPDRKMKLAKELGLQPRQVAVWFQNRRARWKAKQLERLYDSLKLQFDSVSREKQKLQDEVSALKAMVK 107 69**************************************************************************************8887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MEKNSNCDGG GGGGNEKKKR LTSEQLESLE SSFQEEIKLD PDRKMKLAKE LGLQPRQVAV 60 WFQNRRARWK AKQLERLYDS LKLQFDSVSR EKQKLQDEVS ALKAMVKDQA MKNIQASAGH 120 TEISGEETVE STSVRNRSSS RHGGTSHPQM GHGNSAFNVD ELNPVMPP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 17 | 46 | KKKRLTSEQLESLESSFQEEIKLDPDRKMK |
2 | 65 | 73 | RRARWKAKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 2e-44 | HD-ZIP family protein |