PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028079711.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 678aa MW: 77549.4 Da PI: 6.0263

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028079711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	48.1	2.3e-15	500	544	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 ei l+d+ ++ +++i+dAA +L+v+ ++LKr CR yG +RWP Rk XP_028079711.1 500 EIPLDDILQNSKKSIQDAADNLKVSRSTLKRVCRDYGFSRWPPRK 544 688999**************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MAESDRYIPF DFSSDEEGIV AAYFPDDFKQ YMDTQLNRCP VVDDIDIFCG WVFWSREDDQ 60 SEHPPNILDL KRKIKDVLRK CLPYWFEYPT LIQFWAPAMT VEGRSYLTTQ NQPFALSTFD 120 TRFDDDVKGV CGYRMISMDY KFYMDRESSD QQLGVPGRVF NHGFPEFSPN VEYYSIKEYP 180 LRDHALRCQL KLSWAIPLFD PSTHLCVGVL EIVSTAPSEE FLLDCHIDLP DLHNYLEFQN 240 VEKSEALDEI SKVLEVVREV HGLHFAQVWA PCRVSWRCRA LVKGDIFHAI LKFDKVDCYK 300 LLGMVNVELH LKKGQGVVGR AFYSPNVLLC KDVTQLSIID HPLAHYARYD KLGCCFAICL 360 QSCCTGNDIY VLECFMPPSN KDYYGNQQTA LRKILETMKK NFHTFKLASG EELGGHLYIE 420 EIDSVQMSQT TKSLPRLEPL QSGGEMTQLN LSNQQSMDAL SNESNVVRAE QSNIDVTCSR 480 EKGKTKRPKR VHNKTGVKIE IPLDDILQNS KKSIQDAADN LKVSRSTLKR VCRDYGFSRW 540 PPRKKNMAGQ SQPSESSRGV DHQQISQLSF DLPFIQASAT VVHANPHNIA IEDANTVTIR 600 AKYINDITIK FRLSLSSGLV ELQQQIAKRL HLEAGSYYVK YKDEEDQTIL IACDDDLQDC 660 ISTYRLLGTS IVVLIDPK

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MAESDRYIPF DFSSDEEGIV AAYFPDDFKQ YMDTQLNRCP VVDDIDIFCG WVFWSREDDQ  60
SEHPPNILDL KRKIKDVLRK CLPYWFEYPT LIQFWAPAMT VEGRSYLTTQ NQPFALSTFD  120
TRFDDDVKGV CGYRMISMDY KFYMDRESSD QQLGVPGRVF NHGFPEFSPN VEYYSIKEYP  180
LRDHALRCQL KLSWAIPLFD PSTHLCVGVL EIVSTAPSEE FLLDCHIDLP DLHNYLEFQN  240
VEKSEALDEI SKVLEVVREV HGLHFAQVWA PCRVSWRCRA LVKGDIFHAI LKFDKVDCYK  300
LLGMVNVELH LKKGQGVVGR AFYSPNVLLC KDVTQLSIID HPLAHYARYD KLGCCFAICL  360
QSCCTGNDIY VLECFMPPSN KDYYGNQQTA LRKILETMKK NFHTFKLASG EELGGHLYIE  420
EIDSVQMSQT TKSLPRLEPL QSGGEMTQLN LSNQQSMDAL SNESNVVRAE QSNIDVTCSR  480
EKGKTKRPKR VHNKTGVKIE IPLDDILQNS KKSIQDAADN LKVSRSTLKR VCRDYGFSRW  540
PPRKKNMAGQ SQPSESSRGV DHQQISQLSF DLPFIQASAT VVHANPHNIA IEDANTVTIR  600
AKYINDITIK FRLSLSSGLV ELQQQIAKRL HLEAGSYYVK YKDEEDQTIL IACDDDLQDC  660
ISTYRLLGTS IVVLIDPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	2e-78	Nin-like family protein