PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028079710.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 698aa MW: 79635.5 Da PI: 5.6106

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028079710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	48	2.4e-15	520	564	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 ei l+d+ ++ +++i+dAA +L+v+ ++LKr CR yG +RWP Rk XP_028079710.1 520 EIPLDDILQNSKKSIQDAADNLKVSRSTLKRVCRDYGFSRWPPRK 564 688999**************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MAESDRYIPF DFSSDEEGIV AAYFPDDFKQ YMDTQLNRCP VVDDIDIFCG WVFWSREDDQ 60 SEHPPNILDL KRKIKDVLRK CLPYWFEYPT LIQFWAPAMT VEGRSYLTTQ NQPFALSTFD 120 TRFDDDVKGV CGYRMISMDY KFYMDRESSD QQLGVPGRVF NHGFPEFSPN VEYYSIKEYP 180 LRDHALRCQL KLSWAIPLFD PSTHLCVGVL EIVSTAPSEE FLLDCHIDLP DLHNYLEKAG 240 LESSISNADH DTDDTDLFQN VEKSEALDEI SKVLEVVREV HGLHFAQVWA PCRVSWRCRA 300 LVKGDIFHAI LKFDKVDCYK LLGMVNVELH LKKGQGVVGR AFYSPNVLLC KDVTQLSIID 360 HPLAHYARYD KLGCCFAICL QSCCTGNDIY VLECFMPPSN KDYYGNQQTA LRKILETMKK 420 NFHTFKLASG EELGGHLYIE EIDSVQMSQT TKSLPRLEPL QSGGEMTQLN LSNQQSMDAL 480 SNESNVVRAE QSNIDVTCSR EKGKTKRPKR VHNKTGVKIE IPLDDILQNS KKSIQDAADN 540 LKVSRSTLKR VCRDYGFSRW PPRKKNMAGQ SQPSESSRGV DHQQISQLSF DLPFIQASAT 600 VVHANPHNIA IEDANTVTIR AKYINDITIK FRLSLSSGLV ELQQQIAKRL HLEAGSYYVK 660 YKDEEDQTIL IACDDDLQDC ISTYRLLGTS IVVLIDPK

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MAESDRYIPF DFSSDEEGIV AAYFPDDFKQ YMDTQLNRCP VVDDIDIFCG WVFWSREDDQ  60
SEHPPNILDL KRKIKDVLRK CLPYWFEYPT LIQFWAPAMT VEGRSYLTTQ NQPFALSTFD  120
TRFDDDVKGV CGYRMISMDY KFYMDRESSD QQLGVPGRVF NHGFPEFSPN VEYYSIKEYP  180
LRDHALRCQL KLSWAIPLFD PSTHLCVGVL EIVSTAPSEE FLLDCHIDLP DLHNYLEKAG  240
LESSISNADH DTDDTDLFQN VEKSEALDEI SKVLEVVREV HGLHFAQVWA PCRVSWRCRA  300
LVKGDIFHAI LKFDKVDCYK LLGMVNVELH LKKGQGVVGR AFYSPNVLLC KDVTQLSIID  360
HPLAHYARYD KLGCCFAICL QSCCTGNDIY VLECFMPPSN KDYYGNQQTA LRKILETMKK  420
NFHTFKLASG EELGGHLYIE EIDSVQMSQT TKSLPRLEPL QSGGEMTQLN LSNQQSMDAL  480
SNESNVVRAE QSNIDVTCSR EKGKTKRPKR VHNKTGVKIE IPLDDILQNS KKSIQDAADN  540
LKVSRSTLKR VCRDYGFSRW PPRKKNMAGQ SQPSESSRGV DHQQISQLSF DLPFIQASAT  600
VVHANPHNIA IEDANTVTIR AKYINDITIK FRLSLSSGLV ELQQQIAKRL HLEAGSYYVK  660
YKDEEDQTIL IACDDDLQDC ISTYRLLGTS IVVLIDPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	5e-79	Nin-like family protein