PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028078541.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 204aa MW: 23422.8 Da PI: 10.2771 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.7 | 2e-16 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l +a++ +G+++W++Ia + g+ +k+c++rw++yl XP_028078541.1 20 RGSWTAEEDQKLSQAIETYGSKRWESIAVKAGLSHGGKSCRLRWLNYL 67 89******************************999***********97 PP | |||||||
2 | Myb_DNA-binding | 46.3 | 1e-14 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+ + +E +l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_028078541.1 73 KGNISDQEKDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNS 116 678899****************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MSTMAAPKNN SQCTKKRPNR GSWTAEEDQK LSQAIETYGS KRWESIAVKA GLSHGGKSCR 60 LRWLNYLRPN IKKGNISDQE KDLILRLHKL LGNRWSLIAG RLPGRTDNEI KNYWNSRLSK 120 KLRFQSKRKI SKTTQAYKKL QKTKEIKTEK AAGIVKDEGT SKIDENSKIN LIENGDALFD 180 CFEEGPPSLE WMREFLEVDE GCYV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 3e-48 | MYB family protein |