PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028077701.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 273aa MW: 30633.1 Da PI: 5.0599 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.6 | 3e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll+ ++q+G g+W++ ++ g+ R++k+c++rw +yl XP_028077701.1 14 KGPWTAEEDQLLIAFIRQHGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 46.3 | 9.5e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++ E++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l XP_028077701.1 67 RGNFSKGEEDTIINLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MGRAPCCEKM GLKKGPWTAE EDQLLIAFIR QHGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF SKGEEDTIIN LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLKNYQ 120 STSNTKGQTV TEPKCDSNAS SESNTMNSGF ESSEYASASP QDSSSELSSV TDLPGLPNNV 180 VIKDKSMDTS ETFPQIDESF WSEELSTGNS TMQSDFAGFA EELQFQFPLS SSMTASIGTM 240 EHVNEYNFNI DDDMEFWYNL LIKAGGLPEL SEI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 3e-90 | MYB family protein |