PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028077700.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 270aa    MW: 30273.7 Da    PI: 5.2085
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028077700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.62.9e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd+ll+  ++q+G g+W++ ++  g+ R++k+c++rw +yl
   XP_028077700.1 14 KGPWTAEEDQLLIAFIRQHGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding48.71.7e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE+  +++++++lG++ W++Ia++++ gRt++++k+ w+++l
   XP_028077700.1  67 RGNFSKEEEGTIINLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MGRAPCCEKM GLKKGPWTAE EDQLLIAFIR QHGHGNWRAL PKQAGLLRCG KSCRLRWTNY  60
LRPDIKRGNF SKEEEGTIIN LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLKNYQ  120
STSNTKGQTV TEPKCDSNAS SESNTMNSGF ESSEYASVSP QDSSSELSSV TDLTGLPNNV  180
VIKDESMDTS ETFPQIDESF WSEKLSTGNS TTQSDFAGSA EELQFQFPLS SSMTASIGSM  240
EHVNEYNFNI DDDMEFWYNL LIKVGGLPEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.11e-90MYB family protein