PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028077699.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 275aa MW: 30887.4 Da PI: 5.0599 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.5 | 3e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll+ ++q+G g+W++ ++ g+ R++k+c++rw +yl XP_028077699.1 14 KGPWTAEEDQLLIAFIRQHGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 46.6 | 7.8e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ +eE++ +++++++lG++ W++Ia+++ gRt++++k+ w+++l XP_028077699.1 67 RGNFNKEEEDTIINLHEMLGNR-WSAIAARLS-GRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MGRAPCCEKM GLKKGPWTAE EDQLLIAFIR QHGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LKPDIKRGNF NKEEEDTIIN LHEMLGNRWS AIAARLSGRT DNEIKNVWHT HLKKRLKNYQ 120 STSNTKGQTV TEPKCDSNSS GESNTLNSGF ESSEYASVSP QDSSSQLSSV TDLAGLPNNV 180 VIKDESMDTS ETFPQIDESF WSEELSTGNS TMQSDFAGFA EELQFQFPFP LSPSMAASIG 240 TMEHVNEYNF NIDDDMEFWY NLLIKAGGLP ELSKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 4e-85 | MYB family protein |