PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028077443.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family TCP
Protein Properties Length: 464aa    MW: 49942.7 Da    PI: 8.867
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028077443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP118.67.8e-37702231134
             TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssaseceaes 77 
                     a+g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWLl++a ++i+el+                    +           
  XP_028077443.1  70 ATGGKDRHSKVLTSKGLRDRRVRLSVTTAIQFYDLQDRLGVDQPSKAVEWLLKAAAKSIDELPCIkaslpntpkqlrdekrsrE----------- 153
                     5899**********************************************************9995555433333222221110........... PP

             TCP  78 ssssas.....nsssg...............kaaksaakskksqksaasalnlak.esrakarararertrekmrikn 134
                          +     +   +                + +++ +s+ s++s+ s l+l++ esr kar+rarer++ +  +++
  XP_028077443.1 154 -----QglddsA---EmeldgdpnhnqhqqhVSLSKSGCSSTSETSKGSGLSLSRsESRVKARERARERNQMRAEKEK 223
                     .....1122230...13333444444445535555666999999999999******************8876666554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MELDEIQTQG CKFPRIGNGI GKRGREQQYP DVDEDGGEPK RGGGGNGDIG GFGRLICGWP  60
SSRIVRVSRA TGGKDRHSKV LTSKGLRDRR VRLSVTTAIQ FYDLQDRLGV DQPSKAVEWL  120
LKAAAKSIDE LPCIKASLPN TPKQLRDEKR SREQGLDDSA EMELDGDPNH NQHQQHVSLS  180
KSGCSSTSET SKGSGLSLSR SESRVKARER ARERNQMRAE KEKEKESESG AANANHLTNV  240
NPISQSSFTE LLTGGINNVN SNSSSSPNGS AQQNPSGGEA NFFQKTPIDY YASGFLAPSS  300
LASRNHNSSS GFSGQIYLAN STISPFSVAG DHHHHHHPEL QHFSLAPDHF LPVASSAVAG  360
GGSGSDYNLN FTFSAGLAGM NRGTLQSNSP SLLPHRQRLS SSSHIDASNS NVNVNVPFFI  420
GTAAPNAASL ENHHHQFPHG LDGRLQLSYG DSGRHSDHKG KGKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.14e-43TCP family protein