PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028077281.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 406aa MW: 44407.4 Da PI: 6.508

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028077281.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	108.2	1.3e-33	34	138	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......ssssasec....eaesssssasnsss 87 g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak ai+el+++ s ++ + + + + ++++++ XP_028077281.1 34 GRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKDAIDELAELpawkptS--TNA-SfgqnQ---EPQGQQQQQQ 122 89*************************************************************7665431..221.122221...1111111111 PP TCP 88 g..............k 89 + + XP_028077281.1 123 QlggssssssrreinA 138 1222222233333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MGDTHHHHQT RMGLRHGGGE IVEVQGGHIV RSIGRKDRHS KVCTAKGPRD RRVRLAAHTA 60 IQFYDVQDRL GYDRPSKAVD WLIKKAKDAI DELAELPAWK PTSTNASFGQ NQEPQGQQQQ 120 QQQLGGSSSS SSRREINALM GTEDTVVARC EIQDQQMGND ENENNSSFLP PSMDSDAIAD 180 TIKSFFPMGA SAEPNSSAMQ FQNFAAPPDL LSRTGNQSQD LRLSLQSFQD PSILLHHHQQ 240 SQQQHQTEQQ ALFSGTTALG YDAPSSAWSE HHQAAEINRF QRMVAWNGGG DAGTGGGGGG 300 FIFNSPPLFG QNNQFLSQRG PLQSSNTQSI RAWIDPSSSI ATADHNQHHN HYYQSLPIHP 360 SSLQGIGFAS VGGFSGFHIP ARIQGEDEEH DGYSDKPSSA SSDSRH

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MGDTHHHHQT RMGLRHGGGE IVEVQGGHIV RSIGRKDRHS KVCTAKGPRD RRVRLAAHTA  60
IQFYDVQDRL GYDRPSKAVD WLIKKAKDAI DELAELPAWK PTSTNASFGQ NQEPQGQQQQ  120
QQQLGGSSSS SSRREINALM GTEDTVVARC EIQDQQMGND ENENNSSFLP PSMDSDAIAD  180
TIKSFFPMGA SAEPNSSAMQ FQNFAAPPDL LSRTGNQSQD LRLSLQSFQD PSILLHHHQQ  240
SQQQHQTEQQ ALFSGTTALG YDAPSSAWSE HHQAAEINRF QRMVAWNGGG DAGTGGGGGG  300
FIFNSPPLFG QNNQFLSQRG PLQSSNTQSI RAWIDPSSSI ATADHNQHHN HYYQSLPIHP  360
SSLQGIGFAS VGGFSGFHIP ARIQGEDEEH DGYSDKPSSA SSDSRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-100	TCP family protein