PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028077256.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 180aa MW: 20380.5 Da PI: 9.1253 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 51.4 | 1.8e-16 | 17 | 70 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ ++t++q++ Le+ F +++++ e++ +L ++lg++ rq+ +W+qN+Ra++k XP_028077256.1 17 NKKRLTQDQVRLLETSFSSSKKLEPERKLRLVQELGIPPRQIAIWYQNKRARWK 70 56789************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 104.9 | 6.5e-34 | 17 | 108 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rl+++qv+lLE+sF++++kLeperK +l +eLg+ prq+a+W+qn+RAR+k+++lE dy +L+ ++ + +e++rLekeve+L +el+e XP_028077256.1 17 NKKRLTQDQVRLLETSFSSSKKLEPERKLRLVQELGIPPRQIAIWYQNKRARWKAQKLELDYGTLQLRLGTALAEKRRLEKEVERLGRELEE 108 79************************************************************************************999976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MNLMNSQNQK HQSSKHNKKR LTQDQVRLLE TSFSSSKKLE PERKLRLVQE LGIPPRQIAI 60 WYQNKRARWK AQKLELDYGT LQLRLGTALA EKRRLEKEVE RLGRELEEAH MVLLSLKQPP 120 PKSSPPLPPP PPPPPPVSCL SSCSSLHEGH VSCCCWVNNE ALQLEELYAC LTGADGSNCA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 2e-24 | HD-ZIP family protein |