PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028077141.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 328aa MW: 36840.5 Da PI: 6.8515 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.4 | 8e-19 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l d ++++G g+W++ +++ g++R++k+c++rw +yl XP_028077141.1 15 KGPWTPEEDEKLSDFIQKHGHGSWRALPKRAGLNRCGKSCRLRWINYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 57.5 | 3.2e-18 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+ +++d++ lG++ W++Ia++++ gRt++++k++w++++ XP_028077141.1 68 RGKFSEEEERIIIDLHSVLGNK-WSRIAAHLP-GRTDNEIKNYWNTHM 113 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MDMSASHDES VVVKKGPWTP EEDEKLSDFI QKHGHGSWRA LPKRAGLNRC GKSCRLRWIN 60 YLRPDIKRGK FSEEEERIII DLHSVLGNKW SRIAAHLPGR TDNEIKNYWN THMRKKLLQR 120 GIDPKTHKPI PDLNLLGNLS QLLSASPNFG INSMNPWDNI AFRSEVDATH QLAKLQLLQT 180 LMQVINPTPF PNISGNCLLT PNTAQFERGL AGANPQETFD FPNLGLNLNP QIFNNFTDVP 240 SSMTSFEGGY QPEVVNANCN SMVSEYHTQT NQNTLPALVE SSCNVNQVES KINLSYPSSS 300 HSSASNIFEA LEKFLGDEAS GPWKDMLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 9e-78 | MYB family protein |