PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028077061.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Dof
Protein Properties Length: 309aa    MW: 34345.4 Da    PI: 9.1581
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028077061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.11.9e-383999262
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    +++ +kcprCds ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+s+
  XP_028077061.1 39 QQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRSK 99
                    57899***************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MEQEEGMKQQ QQDHHHHHHR RLKPPQTAVQ SDQQTPQPQQ QPQKCPRCDS LNTKFCYYNN  60
YSLSQPRYFC KTCRRYWTQG GTLRNVPVGG GCRKGKRSKA AASSSGGENS RSSQPSPTPQ  120
TQPQLPQPPP SHELQLPQNL AAPDNHSPMS SYYSGSGFLS SLAAMQSMSH HHHHQLPPPP  180
AAFNQNQSLH VGGQFGGSSS NMALLQGFNV PSFSSQQQQA QNQQIQHQNE YYQMGNRDKN  240
LESLYPSDQS LIHPNRPAAS WNQTLTANPG SSSNPSFWNP TTTNNSNTTG TSSLNPNQWS  300
DLQGYGHPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-25Dof family protein