PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076986.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Trihelix
Protein Properties Length: 273aa    MW: 29924 Da    PI: 4.7307
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076986.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix64.52.4e-207672686
        trihelix 26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                    + +p+W++vs++++++g++r+p+qC+++w+nl+++ykkike+e++ ++e++s +++ ++l+
  XP_028076986.1  7 QVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIREEAESFWVMRNDLR 67
                    6689**********************************************99**9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MAFGTGQVEP KWASVSSYCK RHGVNRGPVQ CRKRWSNLAG DYKKIKEWES QIREEAESFW  60
VMRNDLRRER KLPGFFDREV YDILHGGTTA GAPTGLAPAE EGKEGEEQTA AQEVEVEVEA  120
EAVFDSGRSA AAEDGLFSDF EQSVQEEGSG GGGSPEKEFP PAKDVSTTTV PAAVAVPISG  180
TTPVKQSNPE TGATSQEGRK RKRFASDADE ETNTLQSQLI EVLERNGRMV SAQLESQNTN  240
FQLDREQRKD HVDGLVAVLH KLADALGRIA DKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-84Trihelix family protein