PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028076383.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 279aa MW: 31898.1 Da PI: 4.4526 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.1 | 2.3e-19 | 6 | 53 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv++++ +G g W+++a++ g++Rt+k+c++rw++yl XP_028076383.1 6 KGPWTEEEDSTLVNYITIYGEGPWNSVAQCAGLNRTGKSCRLRWLNYL 53 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 43 | 1e-13 | 59 | 102 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E+ l+++++ ++G++ W++Ia+ ++ gRt++++k++w++ XP_028076383.1 59 RGNLTLQEQFLILHLHLRWGNR-WSKIAQQLP-GRTDNEIKNYWRT 102 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 279 aa Download sequence |
MEFIRKGPWT EEEDSTLVNY ITIYGEGPWN SVAQCAGLNR TGKSCRLRWL NYLRPDVRRG 60 NLTLQEQFLI LHLHLRWGNR WSKIAQQLPG RTDNEIKNYW RTRIQKQAKQ LNCDVNSNEF 120 RDTIRNFLLP RLVDQIQAES DALSSMAEPT SIHDSSATET WMIASSSQQQ FLEKQSVFTD 180 CDSDHALANI WLNISSLTDW GGCFGATGLT SDRNNACCEQ DMFDDAEEEE EETMEYRKAS 240 QLAGGGGGGW GSVDTMLYYD GGEEGYTNNT SFDYHYTFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G47190.1 | 3e-75 | MYB family protein |