PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076070.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 328aa    MW: 34888.6 Da    PI: 4.9767
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.13.7e-16235271135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg+
  XP_028076070.1 235 CTHCGISSksTPMMRRGPTGPRTLCNACGLKWANKGV 271
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MPETNHQSSM YGTEPTILQQ QQQQMNQIEE DEEDDEVVGG ESIDNPQIRI EAHSLHDATV  60
GAGSVAVAGA GDAMNGGVDG VHPHALYVPG SEIAPAAAGG GADQLTLSFQ GEVYVFDAVS  120
PDKVQAVLLL LGGYEVPTGI PTVGVAPLNQ RGLGDFPVRS SQPQRAASLN RFREKRKERC  180
FDKKIRYNVR KEVALRMQRR KGQFTSSKAV SDEVHSSSVW TTSQGSAQEE PETSCTHCGI  240
SSKSTPMMRR GPTGPRTLCN ACGLKWANKG VLRDLSKVPA GGIQDPTVKA TEQSEGEAND  300
SDAITSAADI LNSTNGDNPA VNGERYGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.23e-81GATA family protein