PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028076069.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GATA | ||||||||
Protein Properties | Length: 328aa MW: 34888.6 Da PI: 4.9767 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 50.1 | 3.7e-16 | 235 | 271 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp++Rrgp g++tLCnaCGl+++ kg+ XP_028076069.1 235 CTHCGISSksTPMMRRGPTGPRTLCNACGLKWANKGV 271 *****99999************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MPETNHQSSM YGTEPTILQQ QQQQMNQIEE DEEDDEVVGG ESIDNPQIRI EAHSLHDATV 60 GAGSVAVAGA GDAMNGGVDG VHPHALYVPG SEIAPAAAGG GADQLTLSFQ GEVYVFDAVS 120 PDKVQAVLLL LGGYEVPTGI PTVGVAPLNQ RGLGDFPVRS SQPQRAASLN RFREKRKERC 180 FDKKIRYNVR KEVALRMQRR KGQFTSSKAV SDEVHSSSVW TTSQGSAQEE PETSCTHCGI 240 SSKSTPMMRR GPTGPRTLCN ACGLKWANKG VLRDLSKVPA GGIQDPTVKA TEQSEGEAND 300 SDAITSAADI LNSTNGDNPA VNGERYGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 3e-81 | GATA family protein |