PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028075743.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 369aa MW: 41066.7 Da PI: 9.3757

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028075743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	89.7	6.4e-28	66	150	3	66
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....................s 66 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WLl + k+ i++l+ + s XP_028075743.1 66 GGKDRHSKVYTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVVDWLLDATKHDIDKLPPLqmplgnftfhqptatlvshdlS 150 79*************************************************************6666655443322222222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MLSCFLAAQC LEKMITSSRE KDFQAKGEGE NNNTSNIKLS TKAPSSSRQW SAFKNPRIVR 60 VSRSFGGKDR HSKVYTIRGL RDRRIRLSVP TAIQLYDLQD KLGLSQPSKV VDWLLDATKH 120 DIDKLPPLQM PLGNFTFHQP TATLVSHDLS TLQSSFSPFF NANSAYFKDG NKINYNVGNE 180 QMMGKSKDWG SDATMGAKLK GVERETIGEK IKWMRTNEEE SQDGNGGNYN PQVSAHDFFP 240 IASHSSFSNM LSNTMPYSNY YHWDPSNLSL SQFGSHGFAS QTEGSNNTGH LASLPSSFLS 300 PPSNFPPYHP YISAPTENDT RQINHFLPNL PMPSLHPISS PVGVSTTSKN FHLHSQNDER 360 QPNKGSTGS

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MLSCFLAAQC LEKMITSSRE KDFQAKGEGE NNNTSNIKLS TKAPSSSRQW SAFKNPRIVR  60
VSRSFGGKDR HSKVYTIRGL RDRRIRLSVP TAIQLYDLQD KLGLSQPSKV VDWLLDATKH  120
DIDKLPPLQM PLGNFTFHQP TATLVSHDLS TLQSSFSPFF NANSAYFKDG NKINYNVGNE  180
QMMGKSKDWG SDATMGAKLK GVERETIGEK IKWMRTNEEE SQDGNGGNYN PQVSAHDFFP  240
IASHSSFSNM LSNTMPYSNY YHWDPSNLSL SQFGSHGFAS QTEGSNNTGH LASLPSSFLS  300
PPSNFPPYHP YISAPTENDT RQINHFLPNL PMPSLHPISS PVGVSTTSKN FHLHSQNDER  360
QPNKGSTGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-48	TCP family protein