PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028075243.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | TCP | ||||||||
Protein Properties | Length: 194aa MW: 21708.1 Da PI: 5.3528 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 89.2 | 8.8e-28 | 63 | 166 | 17 | 109 |
TCP 17 gRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg...........kaaksaaks 97 +RdRRvRls+++a++f+dLqd+LG+d++sktieWLl+ a ++i+el + ++s + ++e++ss++ + + +++++++ XP_028075243.1 63 LRDRRVRLSVTTAIQFYDLQDRLGYDQPSKTIEWLLKVAAKSIDELSSINTSFPDTPqqlSDEKRSSAGTE---QgfdsadlelggGDQTFHHQK 154 7*********************************************9994444422222233333333332...123466677776555555544 PP TCP 98 kksqksaasaln 109 +++q+++ l+ XP_028075243.1 155 HQQQQQQYVSLS 166 444444443333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MEVDEIQTQG HKFPRIGNGR GDCNKIGQKG EERYPDDEED GEIKRSGGGG IEIGGGGGQQ 60 GLLRDRRVRL SVTTAIQFYD LQDRLGYDQP SKTIEWLLKV AAKSIDELSS INTSFPDTPQ 120 QLSDEKRSSA GTEQGFDSAD LELGGGDQTF HHQKHQQQQQ QYVSLSRARE RRLLACLVIS 180 WVLFCWWIIS GAVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18390.1 | 3e-22 | TCP family protein |